Tag: shiny

Awesome R Shiny Resources & Extensions

Awesome R Shiny Resources & Extensions

Rob Gilmore curates a github repo listing resources for working with Shiny, the R web framework and dashboarding tool.

Nan Xiao curates a second repository, listing awesome R packages offer that extensions to Shiny, like extended UI or server components.

They should be your go-to resources when looking for anything Shiny!

Shiny Resources

Extensions

JavaScript for R — ebook

JavaScript for R — ebook

The R programming language has seen the integration of many languages; C, C++, Python, to name a few, can be seamlessly embedded into R so one can conveniently call code written in other languages from the R console. Little known to many, R works just as well with JavaScript—this book delves into the various ways both languages can work together.

https://book.javascript-for-r.com/

John Coene is an well-known R and JavaScript developer. He recently wrote a book on JavaScript for R users, of which he published an online version free to access here.

The book is definitely worth your while if you want to better learn how to develop front-end applications (in JavaScript) on top of your statistical R programs. Think of better understanding, and building, yourself Shiny modules or advanced data visualizations integrated right into webpages.

A nice step on your development path towards becoming a full stack developer by combining R and JavaScript!

Yet most R developers are not familiar with one of web browsers’ core technology: JavaScript. This book aims to remedy that by revealing how much JavaScript can greatly enhance various stages of data science pipelines from the analysis to the communication of results.

https://book.javascript-for-r.com/

Want to learn more about JavaScript in general, then I recommend this book:

Pimp my RMD: Tips for R Markdown – by Yan Holtz

Pimp my RMD: Tips for R Markdown – by Yan Holtz

R markdown creates interactive reports from R code, including interactive reports, documents, dashboards, presentations, and even books. Have a look at this awesome gallery of R markdown examples.

Yan Holtz recently created a neat little overview of handy R Markdown tips and tricks that improve the appearance of output documents. He dubbed this overview Pimp my RMD. Have a look, it’s worth it!

Via https://rmarkdown.rstudio.com/authoring_quick_tour.html
Harry Plotter: Shiny App of Spell Usage

Harry Plotter: Shiny App of Spell Usage

In my second Harry Plotter blog (22-Aug-2017), I wrote:

I would like to demonstrate how regular expressions can be used to retrieve (sub)strings that follow a specific format. We could use regex to examine, for instance, when, and by whom, which magical spells are cast.

Well, Prusinowskik (real name unknown) beat me to it, and how! S/He formed a comprehensive list of all spells found in the Harry Potter saga (see below), and categorized these into “spells“, “charms“, and “curses“, and into “popular“, “dueling” and “unforgivable” purposes. Next, Prusinowskik built an interactive Shiny application with lovely JavaScript graphs (package: rCharts) for us to discover precisely when during the saga which spells are cast (see also below). Moreover, the analysis was repeated for both the books and the movies.

Truly excellent work Prusinowskik! The Shiny app can be found here.

spells_dash
Overview of dueling spells (interactive)

spells
Overview of spells (interactive)

 

 

 

 

Beer-in-hand Data Science

Beer-in-hand Data Science

Obviously, analysing beer data in high on everybody’s list of favourite things to do in your weekend. Amanda Dobbyn wanted to examine whether she could provide us with an informative categorization the 45.000+ beers in her data set, without having to taste them all herself.

You can find the full report here but you may also like to interactively discover beer similarities yourself in Amanda’s Beer Clustering Shiny App. Or just have a quick look at some of Amanda’s wonderful visualizations below.

A density map of the bitterness (y-axis) and alcohol percentages (x-axis) in the most popular beer styles.

A k-means clustering of each of the 45000 beers in 10 clusters. Try out other settings in Amanda’s Beer Clustering Shiny App.

The alcohol percentages (x), bitterness (y) and cluster assignments of some popular beer styles.

 

Modelling beer’s bitterness (y) by the number of used hops (x).

 

R resources (free courses, books, tutorials, & cheat sheets)

R resources (free courses, books, tutorials, & cheat sheets)

Help yourself to these free books, tutorials, packages, cheat sheets, and many more materials for R programming. There’s a separate overview for handy R programming tricks. If you have additions, please comment below or contact me!


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LAST UPDATED: 2020-08-24


Table of Contents (clickable)

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Introductory R

Introductory Books

Online Courses

Style Guides

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Advanced R

Package Development

Non-standard Evaluation

Functional Programming

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Cheat Sheets

Many of the above cheat sheets are hosted in the official RStudio cheat sheet overview.


Data Manipulation


Data Visualization

Colors

Interactive / HTML / JavaScript widgets

ggplot2

ggplot2 extensions

Miscellaneous

  • coefplot – visualizes model statistics
  • circlize – circular visualizations for categorical data
  • clustree – visualize clustering analysis
  • quantmod – candlestick financial charts
  • dabestr– Data Analysis using Bootstrap-Coupled ESTimation
  • devoutsvg – an SVG graphics device (with pattern fills)
  • devoutpdf – an PDF graphics device
  • cartography – create and integrate maps in your R workflow
  • colorspace – HSL based color palettes
  • viridis – Matplotlib viridis color pallete for R
  • munsell – Munsell color palettes for R
  • Cairo – high-quality display output
  • igraph – Network Analysis and Visualization
  • graphlayouts – new layout algorithms for network visualization
  • lattice – Trellis graphics
  • tmap – thematic maps
  • trelliscopejs – interactive alternative for facet_wrap
  • rgl – interactive 3D plots
  • corrplot – graphical display of a correlation matrix
  • googleVis – Google Charts API
  • plotROC – interactive ROC plots
  • extrafont – fonts in R graphics
  • rvg – produces Vector Graphics that allow further editing in PowerPoint or Excel
  • showtext – text using system fonts
  • animation – animated graphics using ImageMagick.
  • misc3d – 3d plots, isosurfaces, etc.
  • xkcd – xkcd style graphics
  • imager – CImg library to work with images
  • ungeviz – tools for visualize uncertainty
  • waffle – square pie charts a.k.a. waffle charts
  • Creating spectograms in R with hht, warbleR, soundgen, signal, seewave, or phonTools

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Shiny, Dashboards, & Apps


Markdown & Other Output Formats

  • tidystats – automating updating of model statistics
  • papaja – preparing APA journal articles
  • blogdown – build websites with Markdown & Hugo
  • huxtable – create Excel, html, & LaTeX tables
  • xaringan – make slideshows via remark.js and markdown
  • summarytools – produces neat, quick data summary tables
  • citr – RStudio Addin to Insert Markdown Citations

Cloud, Server, & Database

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Statistical Modeling & Machine Learning

Books

Courses

Cheat sheets

Time series

Survival analysis

Bayesian

Miscellaneous

  • corrr – easier correlation matrix management and exploration

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Natural Language Processing & Text Mining

Regular Expressions

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Geographic & Spatial mapping


Bioinformatics & Computational Biology

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Integrated Development Environments (IDEs) &
Graphical User Inferfaces (GUIs)

Descriptions mostly taken from their own websites:

  • RStudio*** – Open source and enterprise ready professional software
  • Jupyter Notebook*** – open-source web application that allows you to create and share documents that contain live code, equations, visualizations and narrative text across dozens of programming languages.
  • Microsoft R tools for Visual Studio – turn Visual Studio into a powerful R IDE
  • R Plugins for Vim, Emax, and Atom editors
  • Rattle*** – GUI for data mining
  • equisse – RStudio add-in to interactively explore and visualize data
  • R Analytic Flow – data flow diagram-based IDE
  • RKWard – easy to use and easily extensible IDE and GUI
  • Eclipse StatET – Eclipse-based IDE
  • OpenAnalytics Architect – Eclipse-based IDE
  • TinnR – open source GUI and IDE
  • DisplayR – cloud-based GUI
  • BlueSkyStatistics – GUI designed to look like SPSS and SAS 
  • ducer – GUI for everyone
  • R commander (Rcmdr) – easy and intuitive GUI
  • JGR – Java-based GUI for R
  • jamovi & jmv – free and open statistical software to bridge the gap between researcher and statistician
  • Exploratory.io – cloud-based data science focused GUI
  • Stagraph – GUI for ggplot2 that allows you to visualize and connect to databases and/or basic file types
  • ggraptr – GUI for visualization (Rapid And Pretty Things in R)
  • ML Studio – interactive Shiny platform for data visualization, statistical modeling and machine learning

R & other software and languages

R & Excel

R & Python

R & SQL

  • sqldf – running SQL statements on R data frames

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R Help, Connect, & Inspiration


R Blogs


R Conferences, Events, & Meetups

R Jobs

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